EnhancerDB
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  3. rs543905300[chr17:55994123]
Enhancers that have rs543905300[chr17:55994123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543905300[chr17:55994123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21773864
chr17 55993715 55994385 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274758
chr17 55994122 55994128 ETS1 JASPAR yes 54998895
chr17 55994123 55994133 RELA JASPAR yes 54998896
chr17 55994123 55994133 REL JASPAR yes 54998897
chr17 55994123 55994134 FOXH1 JASPAR yes 54998898
Genes associated with rs543905300[chr17:55994123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More