EnhancerDB
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  3. rs544017688[chr1:234660586]
Enhancers that have rs544017688[chr1:234660586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544017688[chr1:234660586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880098
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880099
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 21393963
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 107880201
chr1 234659311 234660839 ZBTB33 GTRD no Lung (A549) 107880231
chr1 234660419 234660926 ZNF274 GTRD no Bone Marrow (K562) 21394057
chr1 234660575 234660589 POU4F1 JASPAR yes 36283508
chr1 234660575 234660591 POU4F3 JASPAR yes 36283509
chr1 234660579 234660595 POU4F3 JASPAR yes 36283511
chr1 234660581 234660595 POU4F1 JASPAR yes 36283512
chr1 234660581 234660596 HNF1A JASPAR yes 36283513
chr1 234660582 234660595 HNF1B JASPAR yes 36283514
chr1 234660582 234660596 POU4F1 JASPAR yes 36283515
chr1 234660582 234660598 POU4F2 JASPAR yes 36283516
chr1 234660582 234660598 POU4F3 JASPAR yes 36283517
chr1 234660583 234660595 HNF1B JASPAR yes 36283518
Genes associated with rs544017688[chr1:234660586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More