EnhancerDB
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  3. rs544023464[chr17:42173833]
Enhancers that have rs544023464[chr17:42173833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544023464[chr17:42173833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261860
chr17 42172907 42173854 POLR2A UCSC Txn Factor no Conserved 108261861
chr17 42173197 42173847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761846
chr17 42173197 42173847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261941
chr17 42173821 42173842 IRF1 JASPAR yes 54386521
chr17 42173823 42173838 STAT2 JASPAR yes 54386522
chr17 42173824 42173838 STAT1 JASPAR yes 54386523
chr17 42173825 42173837 IRF1 JASPAR yes 54386524
chr17 42173825 42173840 IRF9 JASPAR yes 54386525
chr17 42173826 42173838 IRF1 JASPAR yes 54386526
chr17 42173826 42173846 RREB1 JASPAR yes 54386527
chr17 42173827 42173848 IRF1 JASPAR yes 54386528
chr17 42173829 42173844 STAT2 JASPAR yes 54386529
chr17 42173831 42173851 RREB1 JASPAR yes 54386530
chr17 42173831 42173852 IRF1 JASPAR yes 54386531
chr17 42173832 42173853 IRF1 JASPAR yes 54386532
chr17 42173833 42173848 FOXP1 JASPAR yes 54386533
Genes associated with rs544023464[chr17:42173833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More