EnhancerDB
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  3. rs544078396[chr10:29911580]
Enhancers that have rs544078396[chr10:29911580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29894589 29921854 enh13094
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs544078396[chr10:29911580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29911575 29911596 IRF1 JASPAR yes 126332766
chr10 29911577 29911592 IRF9 JASPAR yes 126332767
chr10 29911578 29911592 IRF7 JASPAR yes 126332768
chr10 29911579 29911597 IRF2 JASPAR yes 126332769
chr10 29911580 29911592 IRF1 JASPAR yes 126332770
Genes associated with rs544078396[chr10:29911580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More