EnhancerDB
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  3. rs544113088[chr6:109071006]
Enhancers that have rs544113088[chr6:109071006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs544113088[chr6:109071006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109071002 109071007 SP1 TRANSFAC yes 104201606
chr6 109071004 109071017 TFAP2A JASPAR yes 104201607
chr6 109071004 109071017 TFAP2B JASPAR yes 104201608
chr6 109071004 109071017 TFAP2C JASPAR yes 104201609
chr6 109071005 109071019 PLAG1 JASPAR yes 104201610
Genes associated with rs544113088[chr6:109071006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More