EnhancerDB
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  3. rs544119843[chr1:235091936]
Enhancers that have rs544119843[chr1:235091936]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544119843[chr1:235091936]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235091353 235092037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401215
chr1 235091353 235092037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884643
chr1 235091435 235091975 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884644
chr1 235091453 235091959 ZNF274 GTRD no Bone Marrow (K562) 21401216
chr1 235091453 235091959 ZNF274 GTRD no Bone Marrow (K562) 107884645
chr1 235091472 235091992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401217
chr1 235091472 235091992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884646
chr1 235091528 235092066 ZBTB33 GTRD no Lung (A549) 107884647
chr1 235091570 235092025 ZNF274 GTRD no Bone Marrow (K562) 21401222
chr1 235091570 235092025 ZNF274 GTRD no Bone Marrow (K562) 107884652
chr1 235091924 235091938 SPI1 JASPAR yes 36334311
chr1 235091926 235091947 IRF1 JASPAR yes 36334312
chr1 235091927 235091942 LEF1 JASPAR yes 36334313
chr1 235091928 235091943 PRDM1 JASPAR yes 36334314
chr1 235091930 235091942 IRF1 JASPAR yes 36334315
chr1 235091935 235091939 YY1 TRANSFAC yes 36334316
Genes associated with rs544119843[chr1:235091936], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More