EnhancerDB
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  3. rs544189819[chr5:172446257]
Enhancers that have rs544189819[chr5:172446257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs544189819[chr5:172446257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172446248 172446269 IRF1 JASPAR yes 67849060
chr5 172446250 172446265 PRDM1 JASPAR yes 67849061
chr5 172446252 172446264 IRF1 JASPAR yes 67849062
chr5 172446252 172446266 IRF7 JASPAR yes 67849063
chr5 172446256 172446270 RXRB JASPAR yes 67849064
chr5 172446256 172446270 RXRG JASPAR yes 67849065
chr5 172446256 172446271 NR2C2 JASPAR yes 67849066
Genes associated with rs544189819[chr5:172446257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More