EnhancerDB
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  3. rs544202743[chr1:39620567]
Enhancers that have rs544202743[chr1:39620567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544202743[chr1:39620567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39620559 39620569 NFATC3 JASPAR yes 28259518
chr1 39620559 39620573 SPIC JASPAR yes 28259519
chr1 39620561 39620567 ETS1 JASPAR yes 28259520
chr1 39620561 39620582 MAFG JASPAR yes 28259521
chr1 39620565 39620576 NFE2L2 JASPAR yes 28259522
chr1 39620566 39620584 MAFF JASPAR yes 28259523
chr1 39620567 39620573 SOX10 JASPAR yes 28259524
chr1 39620567 39620582 MAFK JASPAR yes 28259525
Genes associated with rs544202743[chr1:39620567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More