EnhancerDB
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  3. rs544210600[chr1:41853325]
Enhancers that have rs544210600[chr1:41853325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544210600[chr1:41853325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41853323 41853333 POU6F2 JASPAR yes 28383559
chr1 41853324 41853334 EMX2 JASPAR yes 28383560
chr1 41853324 41853334 EVX1 JASPAR yes 28383561
chr1 41853324 41853334 EVX2 JASPAR yes 28383562
chr1 41853324 41853334 LHX2 JASPAR yes 28383563
chr1 41853324 41853334 MEOX1 JASPAR yes 28383564
chr1 41853324 41853334 NOTO JASPAR yes 28383565
chr1 41853325 41853333 LBX1 JASPAR yes 28383566
chr1 41853325 41853333 PDX1 JASPAR yes 28383567
chr1 41853325 41853333 VAX1 JASPAR yes 28383568
chr1 41853325 41853333 VAX2 JASPAR yes 28383569
chr1 41853325 41853333 VSX1 JASPAR yes 28383570
chr1 41853325 41853333 VSX2 JASPAR yes 28383571
Genes associated with rs544210600[chr1:41853325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More