EnhancerDB
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  3. rs544248526[chr1:16208848]
Enhancers that have rs544248526[chr1:16208848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544248526[chr1:16208848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 21325255
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 107802203
chr1 16208839 16208851 ZBTB7B JASPAR yes 27010145
chr1 16208841 16208851 ZNF740 JASPAR yes 27010146
chr1 16208842 16208852 ZNF740 JASPAR yes 27010147
chr1 16208847 16208851 H1TF2 TRANSFAC yes 27010148
chr1 16208847 16208851 NFE TRANSFAC yes 27010149
chr1 16208847 16208851 SRF TRANSFAC yes 27010150
Genes associated with rs544248526[chr1:16208848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More