EnhancerDB
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  3. rs544260611[chr1:23459008]
Enhancers that have rs544260611[chr1:23459008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs544260611[chr1:23459008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23459002 23459017 FOXP1 JASPAR yes 27417022
chr1 23459003 23459018 FOXP1 JASPAR yes 27417023
chr1 23459004 23459010 TBP TRANSFAC yes 27417024
chr1 23459004 23459019 FOXP1 JASPAR yes 27417025
chr1 23459005 23459020 FOXP1 JASPAR yes 27417026
chr1 23459005 23459026 IRF1 JASPAR yes 27417027
chr1 23459006 23459021 FOXP1 JASPAR yes 27417028
chr1 23459006 23459027 IRF1 JASPAR yes 27417029
chr1 23459007 23459022 FOXP1 JASPAR yes 27417030
Genes associated with rs544260611[chr1:23459008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More