EnhancerDB
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  3. rs544267561[chr1:181084998]
Enhancers that have rs544267561[chr1:181084998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544267561[chr1:181084998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181083509 181085142 ZNF143 GTRD no Epithelial (MCF-7) 21354749
chr1 181083715 181085389 ZNF274 GTRD no Bone Marrow (K562) 21354752
chr1 181083752 181085029 ZNF143 GTRD no Epithelial (MCF-7) 21354754
chr1 181083770 181085035 ZNF274 GTRD no Bone Marrow (K562) 21354755
chr1 181083794 181085151 ZNF274 GTRD no Bone Marrow (K562) 21354757
chr1 181083859 181085317 ZNF274 GTRD no Bone Marrow (K562) 21354761
chr1 181083869 181085099 ZNF274 GTRD no Bone Marrow (K562) 21354762
chr1 181083896 181085020 ZNF274 GTRD no Bone Marrow (K562) 21354766
chr1 181083917 181085020 ZNF274 GTRD no Bone Marrow (K562) 21354771
chr1 181083968 181085024 ZNF274 GTRD no Bone Marrow (K562) 21354778
chr1 181083970 181085084 ZNF274 GTRD no Bone Marrow (K562) 21354779
chr1 181084039 181085060 ZNF274 GTRD no Bone Marrow (K562) 21354802
chr1 181084143 181085059 ZNF274 GTRD no Bone Marrow (K562) 21354825
chr1 181084637 181085047 ZNF274 GTRD no Blood (GM12878) 21354870
chr1 181084896 181085116 ZNF143 GTRD no Epithelial (MCF-7) 21354871
chr1 181084994 181085005 HOXC11 JASPAR yes 33554741
chr1 181084994 181085005 HOXC12 JASPAR yes 33554742
chr1 181084995 181085005 HOXD11 JASPAR yes 33554743
Genes associated with rs544267561[chr1:181084998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More