EnhancerDB
  1. Home
  2. SNP
  3. rs544487798[chr1:41858849]
Enhancers that have rs544487798[chr1:41858849]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544487798[chr1:41858849]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41858843 41858855 HLF JASPAR yes 28384379
chr1 41858845 41858856 YY2 JASPAR yes 28384380
chr1 41858846 41858858 YY1 JASPAR yes 28384381
Genes associated with rs544487798[chr1:41858849], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More