EnhancerDB
  1. Home
  2. SNP
  3. rs544519900[chr1:19278097]
Enhancers that have rs544519900[chr1:19278097]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544519900[chr1:19278097]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19277822 19279058 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802290
chr1 19278088 19278099 FLI1 JASPAR yes 27165375
chr1 19278089 19278099 ETV6 JASPAR yes 27165376
chr1 19278089 19278102 ELF1 JASPAR yes 27165377
chr1 19278089 19278103 SPI1 JASPAR yes 27165378
chr1 19278090 19278097 SPI1 JASPAR yes 27165379
chr1 19278090 19278098 EHF JASPAR yes 27165380
chr1 19278092 19278099 SPIB JASPAR yes 27165381
Genes associated with rs544519900[chr1:19278097], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More