EnhancerDB
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  3. rs544581653[chr1:168446394]
Enhancers that have rs544581653[chr1:168446394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 168446219 168446589 vista3807
VISTA
Transcript factors that have rs544581653[chr1:168446394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168445161 168446566 ZNF274 GTRD no Bone Marrow (K562) 21348273
chr1 168445161 168446566 ZNF274 GTRD no Bone Marrow (K562) 107844746
chr1 168445407 168446447 ZNF274 GTRD no Bone Marrow (K562) 21348275
chr1 168445407 168446447 ZNF274 GTRD no Bone Marrow (K562) 107844748
chr1 168445418 168446464 ZNF274 GTRD no Bone Marrow (K562) 21348276
chr1 168445418 168446464 ZNF274 GTRD no Bone Marrow (K562) 107844749
chr1 168445452 168446449 ZNF274 GTRD no Bone Marrow (K562) 21348277
chr1 168445452 168446449 ZNF274 GTRD no Bone Marrow (K562) 107844750
chr1 168445524 168446439 ZNF274 GTRD no Bone Marrow (K562) 21348283
chr1 168445524 168446439 ZNF274 GTRD no Bone Marrow (K562) 107844752
chr1 168445618 168446655 ZNF274 GTRD no Bone Marrow (K562) 21348293
chr1 168445618 168446655 ZNF274 GTRD no Bone Marrow (K562) 107844754
chr1 168446257 168446601 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844758
chr1 168446391 168446401 HOXB13 JASPAR yes 32929575
chr1 168446391 168446401 HOXB13 JASPAR yes 118395124
chr1 168446392 168446412 RREB1 JASPAR yes 32929576
chr1 168446392 168446412 RREB1 JASPAR yes 118395125
Genes associated with rs544581653[chr1:168446394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More