EnhancerDB
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  3. rs544647136[chr16:4332086]
Enhancers that have rs544647136[chr16:4332086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544647136[chr16:4332086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4331935 4333290 TCF7L2 GTRD no Colon (HCT116) 21686278
chr16 4331940 4333630 ZNF143 GTRD no Epithelial (MCF-7) 21686279
chr16 4331940 4333886 ZNF143 GTRD no Epithelial (MCF-7) 21686280
chr16 4332022 4333423 TCF7L2 GTRD no Colon (HCT116) 21686281
chr16 4332078 4332090 GRHL1 JASPAR yes 9265756
chr16 4332081 4332091 HMBOX1 JASPAR yes 9265758
chr16 4332084 4332099 HNF1A JASPAR yes 9265759
chr16 4332085 4332097 HNF1B JASPAR yes 9265760
chr16 4332086 4332100 SPIC JASPAR yes 9265761
Genes associated with rs544647136[chr16:4332086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More