EnhancerDB
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  3. rs544652554[chr16:25007058]
Enhancers that have rs544652554[chr16:25007058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544652554[chr16:25007058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 21699251
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 108189409
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 21699254
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 108189413
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 21699285
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 108189453
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 21699293
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 108189462
chr16 25005771 25007289 ZNF143 GTRD no Epithelial (MCF-7) 21699301
chr16 25005771 25007289 ZNF143 GTRD no Epithelial (MCF-7) 108189470
chr16 25005799 25007095 ZNF274 GTRD no Cervix (HeLa-S3) 21699305
chr16 25005799 25007095 ZNF274 GTRD no Cervix (HeLa-S3) 108189475
chr16 25007055 25007070 HNF4A JASPAR yes 10093650
chr16 25007056 25007071 HNF4G JASPAR yes 10093651
Genes associated with rs544652554[chr16:25007058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More