EnhancerDB
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  3. rs544675942[chr11:12457339]
Enhancers that have rs544675942[chr11:12457339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs544675942[chr11:12457339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12457325 12457345 RREB1 JASPAR yes 37446176
chr11 12457326 12457341 FOXP1 JASPAR yes 37446177
chr11 12457327 12457347 RREB1 JASPAR yes 37446179
chr11 12457330 12457350 RREB1 JASPAR yes 37446180
chr11 12457333 12457353 RREB1 JASPAR yes 37446181
chr11 12457334 12457340 TCF4 TRANSFAC yes 37446182
chr11 12457336 12457356 RREB1 JASPAR yes 37446183
chr11 12457339 12457359 RREB1 JASPAR yes 37446184
Genes associated with rs544675942[chr11:12457339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More