EnhancerDB
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  3. rs544697969[chr17:56020308]
Enhancers that have rs544697969[chr17:56020308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544697969[chr17:56020308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56020202 56020955 ZNF274 GTRD no Blood (GM12878) 21773920
chr17 56020202 56020955 ZNF274 GTRD no Blood (GM12878) 108274822
chr17 56020207 56020955 ZNF274 GTRD no Blood (GM12878) 21773921
chr17 56020207 56020955 ZNF274 GTRD no Blood (GM12878) 108274823
chr17 56020237 56020871 ZNF274 GTRD no Blood (GM12878) 21773922
chr17 56020237 56020871 ZNF274 GTRD no Blood (GM12878) 108274824
chr17 56020258 56020828 ZNF274 GTRD no Blood (GM12878) 21773923
chr17 56020258 56020828 ZNF274 GTRD no Blood (GM12878) 108274825
chr17 56020301 56020315 TLX1 JASPAR yes 55002725
chr17 56020301 56020741 ZNF274 GTRD no Blood (GM12878) 21773924
chr17 56020301 56020741 ZNF274 GTRD no Blood (GM12878) 108274826
Genes associated with rs544697969[chr17:56020308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More