EnhancerDB
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  3. rs544853717[chr12:125235708]
Enhancers that have rs544853717[chr12:125235708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544853717[chr12:125235708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125235315 125235779 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582740
chr12 125235330 125235758 ZNF274 GTRD no Liver (HepG2) 21582743
chr12 125235353 125235723 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582746
chr12 125235421 125235777 ZNF274 GTRD no Bone Marrow (K562) 21582754
chr12 125235690 125235940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582765
Genes associated with rs544853717[chr12:125235708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More