EnhancerDB
  1. Home
  2. SNP
  3. rs544900401[chr3:58024767]
Enhancers that have rs544900401[chr3:58024767]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544900401[chr3:58024767]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58024752 58024767 FOXP1 JASPAR yes 2667816
chr3 58024753 58024768 FOXP1 JASPAR yes 2667817
chr3 58024754 58024769 FOXP1 JASPAR yes 2667818
chr3 58024756 58024771 MEF2C JASPAR yes 2667819
chr3 58024765 58024771 TBP TRANSFAC yes 2667820
Genes associated with rs544900401[chr3:58024767], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More