EnhancerDB
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  3. rs544996489[chr5:172202172]
Enhancers that have rs544996489[chr5:172202172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172202171 172203025 vista50166
VISTA
Transcript factors that have rs544996489[chr5:172202172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172202162 172202172 EMX1 JASPAR yes 67824844
chr5 172202162 172202172 HOXB3 JASPAR yes 67824845
chr5 172202162 172202172 NOTO JASPAR yes 67824846
chr5 172202162 172202172 EMX1 JASPAR yes 70762919
chr5 172202162 172202172 HOXB3 JASPAR yes 70762920
chr5 172202162 172202172 NOTO JASPAR yes 70762921
Genes associated with rs544996489[chr5:172202172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More