EnhancerDB
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  3. rs545001720[chr1:43402820]
Enhancers that have rs545001720[chr1:43402820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr1 43402778 43403133 vista1384
VISTA
Transcript factors that have rs545001720[chr1:43402820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803002
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803003
chr1 43402812 43402829 BCL6B JASPAR yes 28468229
chr1 43402812 43402829 BCL6B JASPAR yes 118281595
chr1 43402820 43402834 POU1F1 JASPAR yes 28468230
chr1 43402820 43402834 POU1F1 JASPAR yes 118281596
Genes associated with rs545001720[chr1:43402820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More