EnhancerDB
  1. Home
  2. SNP
  3. rs545052299[chr16:85264640]
Enhancers that have rs545052299[chr16:85264640]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs545052299[chr16:85264640]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85263615 85264967 TCF7L2 GTRD no Colon (HCT116) 21721701
chr16 85263615 85264967 TCF7L2 GTRD no Colon (HCT116) 108213541
chr16 85263651 85265556 ZNF143 GTRD no Epithelial (MCF-7) 21721702
chr16 85263651 85265556 ZNF143 GTRD no Epithelial (MCF-7) 108213542
chr16 85263672 85265121 TCF7L2 GTRD no Colon (HCT116) 21721703
chr16 85263672 85265121 TCF7L2 GTRD no Colon (HCT116) 108213543
chr16 85263734 85265114 TCF7L2 GTRD no Colon (HCT116) 21721704
chr16 85263734 85265114 TCF7L2 GTRD no Colon (HCT116) 108213544
chr16 85263861 85265143 ZNF274 GTRD no Bone Marrow (K562) 21721705
chr16 85263861 85265143 ZNF274 GTRD no Bone Marrow (K562) 108213545
chr16 85263861 85265267 TCF7L2 GTRD no Colon (HCT116) 21721706
chr16 85263861 85265267 TCF7L2 GTRD no Colon (HCT116) 108213546
chr16 85263906 85267681 ZNF143 GTRD no Epithelial (MCF-7) 21721707
chr16 85263906 85267681 ZNF143 GTRD no Epithelial (MCF-7) 108213547
chr16 85264044 85265134 ZNF143 GTRD no Epithelial (MCF-7) 21721708
chr16 85264044 85265134 ZNF143 GTRD no Epithelial (MCF-7) 108213548
chr16 85264114 85265617 ZNF143 GTRD no Epithelial (MCF-7) 21721709
chr16 85264114 85265617 ZNF143 GTRD no Epithelial (MCF-7) 108213549
chr16 85264246 85264967 TCF7L2 GTRD no Colon (HCT116) 21721710
chr16 85264246 85264967 TCF7L2 GTRD no Colon (HCT116) 108213550
chr16 85264462 85265018 ZNF274 GTRD no Bone Marrow (K562) 21721711
chr16 85264462 85265018 ZNF274 GTRD no Bone Marrow (K562) 108213551
chr16 85264476 85266112 ZNF274 GTRD no Bone Marrow (K562) 21721712
chr16 85264476 85266112 ZNF274 GTRD no Bone Marrow (K562) 108213552
chr16 85264533 85264936 ZNF274 GTRD no Bone Marrow (K562) 21721713
chr16 85264581 85264965 ZNF274 GTRD no Bone Marrow (K562) 21721714
chr16 85264586 85264741 ZNF274 GTRD no Blood (GM12878) 21721715
chr16 85264599 85265064 ZNF274 GTRD no Liver (HepG2) 21721716
chr16 85264620 85264641 ZNF263 JASPAR yes 12035932
chr16 85264624 85264645 ZNF263 JASPAR yes 12035934
chr16 85264627 85264982 ZNF274 GTRD no Liver (HepG2) 21721717
chr16 85264636 85264657 ZNF263 JASPAR yes 12035935
chr16 85264639 85264644 GATA2 JASPAR yes 12035936
chr16 85264639 85265638 ZNF274 GTRD no Bone Marrow (K562) 21721718
Genes associated with rs545052299[chr16:85264640], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More