EnhancerDB
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  3. rs545087957[chr1:24600409]
Enhancers that have rs545087957[chr1:24600409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs545087957[chr1:24600409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24600048 24601656 ZNF143 GTRD no Epithelial (MCF-7) 21325290
chr1 24600403 24600416 NR2F1 JASPAR yes 27494071
chr1 24600405 24600416 ESRRA JASPAR yes 27494072
chr1 24600405 24600416 ESRRB JASPAR yes 27494073
chr1 24600406 24600414 NR4A2 JASPAR yes 27494074
Genes associated with rs545087957[chr1:24600409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More