EnhancerDB
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  3. rs545281739[chr6:112311200]
Enhancers that have rs545281739[chr6:112311200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
chr6 112311135 112311681 vista53166
VISTA
Transcript factors that have rs545281739[chr6:112311200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112311186 112311205 PAX5 JASPAR yes 70419480
chr6 112311186 112311205 PAX5 JASPAR yes 104394927
chr6 112311193 112311202 SNAI2 JASPAR yes 70419481
chr6 112311193 112311202 SNAI2 JASPAR yes 104394928
chr6 112311195 112311204 ZEB1 JASPAR yes 70419482
chr6 112311195 112311204 ZEB1 JASPAR yes 104394929
chr6 112311195 112311205 TBX21 JASPAR yes 70419483
chr6 112311195 112311205 TBX21 JASPAR yes 104394930
chr6 112311195 112311206 TBX2 JASPAR yes 70419484
chr6 112311195 112311206 TBX2 JASPAR yes 104394931
chr6 112311195 112311208 EOMES JASPAR yes 70419485
chr6 112311195 112311208 EOMES JASPAR yes 104394932
chr6 112311196 112311204 MGA JASPAR yes 70419486
chr6 112311196 112311204 TBX15 JASPAR yes 70419487
chr6 112311196 112311204 TBX1 JASPAR yes 70419488
chr6 112311196 112311204 TBX4 JASPAR yes 70419489
chr6 112311196 112311204 TBX5 JASPAR yes 70419490
chr6 112311196 112311204 MGA JASPAR yes 104394933
chr6 112311196 112311204 TBX15 JASPAR yes 104394934
chr6 112311196 112311204 TBX1 JASPAR yes 104394935
chr6 112311196 112311204 TBX4 JASPAR yes 104394936
chr6 112311196 112311204 TBX5 JASPAR yes 104394937
chr6 112311196 112311206 TBR1 JASPAR yes 70419491
chr6 112311196 112311206 TBR1 JASPAR yes 104394938
chr6 112311200 112311208 MEIS3 JASPAR yes 70419492
chr6 112311200 112311208 MEIS3 JASPAR yes 104394939
Genes associated with rs545281739[chr6:112311200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More