EnhancerDB
  1. Home
  2. SNP
  3. rs545378448[chr19:11202058]
Enhancers that have rs545378448[chr19:11202058]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11201485 11209555 enh17921
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs545378448[chr19:11202058]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384248
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384249
chr19 11201530 11202272 ZNF143 GTRD no Epithelial (MCF-7) 21849323
chr19 11201530 11202272 ZNF143 GTRD no Epithelial (MCF-7) 108384250
chr19 11201559 11202959 TCF7L2 GTRD no Colon (HCT116) 108384251
chr19 11201783 11202258 ZNF143 GTRD no Epithelial (MCF-7) 21849324
chr19 11201783 11202258 ZNF143 GTRD no Epithelial (MCF-7) 108384252
chr19 11201946 11202510 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849325
chr19 11201946 11202510 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384253
chr19 11202039 11202060 IRF1 JASPAR yes 112455182
chr19 11202044 11202059 MEF2A JASPAR yes 112455184
chr19 11202045 11202060 FOXP1 JASPAR yes 112455185
chr19 11202045 11202060 MEF2C JASPAR yes 112455186
chr19 11202045 11202066 IRF1 JASPAR yes 112455187
chr19 11202046 11202058 FOXC2 JASPAR yes 112455188
chr19 11202046 11202058 MEF2A JASPAR yes 112455189
chr19 11202046 11202058 MEF2B JASPAR yes 112455190
chr19 11202046 11202058 MEF2D JASPAR yes 112455191
chr19 11202050 11202065 FOXA1 JASPAR yes 112455194
chr19 11202051 11202066 FOXP1 JASPAR yes 112455195
chr19 11202052 11202063 FOXP2 JASPAR yes 112455196
chr19 11202052 11202064 FOXC2 JASPAR yes 112455197
chr19 11202052 11202066 POU1F1 JASPAR yes 112455198
chr19 11202053 11202064 FOXB1 JASPAR yes 112455199
chr19 11202053 11202064 FOXC1 JASPAR yes 112455200
chr19 11202053 11202069 POU4F2 JASPAR yes 112455201
chr19 11202053 11202069 POU4F3 JASPAR yes 112455202
chr19 11202054 11202058 YY1 TRANSFAC yes 112455203
chr19 11202054 11202065 FOXA1 JASPAR yes 112455204
chr19 11202055 11202070 HNF1A JASPAR yes 112455205
chr19 11202057 11202064 NKX3-1 JASPAR yes 112455206
chr19 11202057 11202373 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21849326
chr19 11202057 11202373 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384254
chr19 11202058 11202073 FOXA1 JASPAR yes 112455207
Genes associated with rs545378448[chr19:11202058], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More