EnhancerDB
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  3. rs545387236[chr12:125230150]
Enhancers that have rs545387236[chr12:125230150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs545387236[chr12:125230150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125229954 125230694 ZNF274 GTRD no Bone Marrow (K562) 21582633
chr12 125229954 125230694 ZNF274 GTRD no Bone Marrow (K562) 108069764
chr12 125230004 125230158 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582634
chr12 125230122 125230432 ZNF274 GTRD no Bone Marrow (K562) 21582635
chr12 125230124 125230686 ZNF274 GTRD no Bone Marrow (K562) 21582636
chr12 125230124 125230686 ZNF274 GTRD no Bone Marrow (K562) 108069765
chr12 125230138 125230153 FOXA1 JASPAR yes 124416799
chr12 125230139 125230150 FOXB1 JASPAR yes 124416800
chr12 125230139 125230150 FOXC1 JASPAR yes 124416801
chr12 125230139 125230151 FOXC2 JASPAR yes 124416802
chr12 125230141 125230156 HNF1A JASPAR yes 124416803
chr12 125230142 125230155 HNF1B JASPAR yes 124416804
chr12 125230142 125230158 POU4F2 JASPAR yes 124416805
chr12 125230147 125230151 YY1 TRANSFAC yes 124416806
chr12 125230147 125230500 ZNF274 GTRD no Bone Marrow (K562) 21582637
chr12 125230147 125230556 ZNF274 GTRD no Bone Marrow (K562) 21582638
Genes associated with rs545387236[chr12:125230150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More