EnhancerDB
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  3. rs545407619[chr17:28061966]
Enhancers that have rs545407619[chr17:28061966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545407619[chr17:28061966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28061954 28061968 NR2F1 JASPAR yes 53755506
chr17 28061960 28061974 TCF7L2 JASPAR yes 53755507
chr17 28061960 28061975 HNF4G JASPAR yes 53755508
chr17 28061960 28061975 LEF1 JASPAR yes 53755509
chr17 28061961 28061976 HNF4A JASPAR yes 53755510
chr17 28061964 28061970 TCF1 TRANSFAC yes 53755511
Genes associated with rs545407619[chr17:28061966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More