EnhancerDB
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  3. rs545653222[chr17:55535460]
Enhancers that have rs545653222[chr17:55535460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545653222[chr17:55535460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55535454 55535475 IRF1 JASPAR yes 54956489
chr17 55535455 55535476 IRF1 JASPAR yes 54956490
chr17 55535456 55535477 IRF1 JASPAR yes 54956491
chr17 55535457 55535478 IRF1 JASPAR yes 54956492
chr17 55535458 55535473 FOXP1 JASPAR yes 54956493
chr17 55535458 55535479 IRF1 JASPAR yes 54956494
chr17 55535459 55535474 FOXP1 JASPAR yes 54956495
chr17 55535460 55535475 FOXP1 JASPAR yes 54956496
Genes associated with rs545653222[chr17:55535460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More