EnhancerDB
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  3. rs545671127[chr6:88436016]
Enhancers that have rs545671127[chr6:88436016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs545671127[chr6:88436016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88436010 88436031 IRF1 JASPAR yes 103325428
chr6 88436013 88436028 FOXP1 JASPAR yes 103325429
chr6 88436015 88436030 FOXP1 JASPAR yes 103325430
chr6 88436016 88436031 FOXP1 JASPAR yes 103325431
Genes associated with rs545671127[chr6:88436016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More