EnhancerDB
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  3. rs545680868[chr1:39629678]
Enhancers that have rs545680868[chr1:39629678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 39629409 39631707 vista40
VISTA
Transcript factors that have rs545680868[chr1:39629678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39629670 39629682 MEF2A JASPAR yes 28260989
chr1 39629670 39629682 MEF2D JASPAR yes 28260990
chr1 39629670 39629682 MEF2A JASPAR yes 71129024
chr1 39629670 39629682 MEF2D JASPAR yes 71129025
chr1 39629671 39629681 MEF2A JASPAR yes 28260991
chr1 39629671 39629681 MEF2A JASPAR yes 71129026
chr1 39629672 39629680 FOXL1 JASPAR yes 28260992
chr1 39629672 39629680 FOXL1 JASPAR yes 71129027
Genes associated with rs545680868[chr1:39629678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More