EnhancerDB
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  3. rs546011329[chr17:28035623]
Enhancers that have rs546011329[chr17:28035623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546011329[chr17:28035623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28035606 28035627 IRF1 JASPAR yes 53751528
chr17 28035607 28035628 IRF1 JASPAR yes 53751530
chr17 28035608 28035623 FOXP1 JASPAR yes 53751531
chr17 28035608 28035629 IRF1 JASPAR yes 53751532
chr17 28035609 28035624 FOXP1 JASPAR yes 53751533
chr17 28035609 28035630 IRF1 JASPAR yes 53751534
chr17 28035610 28035625 FOXP1 JASPAR yes 53751535
chr17 28035610 28035631 IRF1 JASPAR yes 53751536
chr17 28035611 28035626 FOXP1 JASPAR yes 53751537
chr17 28035613 28035628 FOXP1 JASPAR yes 53751538
chr17 28035614 28035629 STAT2 JASPAR yes 53751539
chr17 28035615 28035630 FOXP1 JASPAR yes 53751540
chr17 28035617 28035629 FOXC2 JASPAR yes 53751541
chr17 28035617 28035637 RREB1 JASPAR yes 53751542
chr17 28035618 28035629 FOXP2 JASPAR yes 53751543
chr17 28035619 28035634 FOXP1 JASPAR yes 53751544
chr17 28035620 28035631 FOXA1 JASPAR yes 53751545
chr17 28035620 28035635 FOXA1 JASPAR yes 53751546
chr17 28035621 28035633 FOXC2 JASPAR yes 53751547
chr17 28035621 28035641 RREB1 JASPAR yes 53751548
chr17 28035622 28035634 FOXI1 JASPAR yes 53751549
Genes associated with rs546011329[chr17:28035623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More