EnhancerDB
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  3. rs546042081[chr12:46609319]
Enhancers that have rs546042081[chr12:46609319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs546042081[chr12:46609319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608203 46609441 ZBTB33 GTRD no Brain (SK-N-SH) 108026929
chr12 46608234 46609458 ZBTB33 GTRD no Brain (SK-N-SH) 108026930
chr12 46608271 46609345 ZBTB33 GTRD no Brain (SK-N-SH) 108026932
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46608861 46609696 ZNF274 GTRD no Blood (GM12878) 21541062
chr12 46608861 46609696 ZNF274 GTRD no Blood (GM12878) 108026956
chr12 46609079 46609485 ZNF274 GTRD no Liver (HepG2) 108026963
chr12 46609114 46609838 GATA3 GTRD no Thymus 21541068
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026964
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026965
Genes associated with rs546042081[chr12:46609319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More