EnhancerDB
  1. Home
  2. SNP
  3. rs546050477[chr6:47212335]
Enhancers that have rs546050477[chr6:47212335]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47202205 47219001 enh9147
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546050477[chr6:47212335]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47212323 47212335 IRF1 JASPAR yes 102014625
chr6 47212333 47212337 YY1 TRANSFAC yes 102014626
Genes associated with rs546050477[chr6:47212335], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More