EnhancerDB
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  3. rs546093302[chr1:212768205]
Enhancers that have rs546093302[chr1:212768205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546093302[chr1:212768205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212768196 212768206 ID4 JASPAR yes 35139313
chr1 212768196 212768206 TCF3 JASPAR yes 35139314
chr1 212768196 212768206 TCF4 JASPAR yes 35139315
chr1 212768197 212768206 SNAI2 JASPAR yes 35139316
Genes associated with rs546093302[chr1:212768205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More