EnhancerDB
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  3. rs546104024[chr2:232479106]
Enhancers that have rs546104024[chr2:232479106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232478879 232479328 vista35161
VISTA
Transcript factors that have rs546104024[chr2:232479106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435689
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435690
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435691
chr2 232478401 232479330 TCF7L2 UCSC Txn Factor no Conserved 108435694
chr2 232478401 232479330 TCF7L2 UCSC Txn Factor no Conserved 108435695
chr2 232478530 232479272 E2F1 UCSC Txn Factor no Conserved 108435699
chr2 232478530 232479272 E2F1 UCSC Txn Factor no Conserved 108435700
chr2 232479095 232479106 E2F4 JASPAR yes 22229289
chr2 232479095 232479106 E2F4 JASPAR yes 81726145
Genes associated with rs546104024[chr2:232479106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More