EnhancerDB
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  3. rs546196252[chr1:23450992]
Enhancers that have rs546196252[chr1:23450992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs546196252[chr1:23450992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23450983 23450998 RUNX2 JASPAR yes 27415638
chr1 23450986 23450992 SOX10 JASPAR yes 27415639
chr1 23450987 23450997 RUNX3 JASPAR yes 27415640
chr1 23450990 23451000 SREBF1 JASPAR yes 27415641
chr1 23450990 23451000 SREBF2 JASPAR yes 27415642
chr1 23450990 23451004 JUN JASPAR yes 27415643
chr1 23450991 23450999 MGA JASPAR yes 27415644
Genes associated with rs546196252[chr1:23450992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More