EnhancerDB
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  3. rs546232200[chr16:89503993]
Enhancers that have rs546232200[chr16:89503993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546232200[chr16:89503993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89503988 89504000 TGIF1 JASPAR yes 12344128
chr16 89503991 89504010 REST JASPAR yes 12344129
Genes associated with rs546232200[chr16:89503993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More