EnhancerDB
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  3. rs546249459[chr17:57848958]
Enhancers that have rs546249459[chr17:57848958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546249459[chr17:57848958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57848775 57854871 ZBTB33 GTRD no Lung (A549) 108276728
chr17 57848947 57848962 RUNX2 JASPAR yes 55080190
chr17 57848948 57848968 RREB1 JASPAR yes 55080191
chr17 57848949 57848969 RREB1 JASPAR yes 55080192
chr17 57848950 57848964 ONECUT3 JASPAR yes 55080193
chr17 57848950 57848970 RREB1 JASPAR yes 55080194
chr17 57848954 57848974 RREB1 JASPAR yes 55080195
chr17 57848955 57848976 IRF1 JASPAR yes 55080196
chr17 57848956 57848971 RUNX2 JASPAR yes 55080197
Genes associated with rs546249459[chr17:57848958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More