EnhancerDB
  1. Home
  2. SNP
  3. rs546297280[chr17:55552083]
Enhancers that have rs546297280[chr17:55552083]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546297280[chr17:55552083]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55552065 55552085 RREB1 JASPAR yes 54958961
chr17 55552065 55552086 IRF1 JASPAR yes 54958962
chr17 55552066 55552087 IRF1 JASPAR yes 54958965
chr17 55552070 55552084 IRF7 JASPAR yes 54958968
chr17 55552071 55552091 RREB1 JASPAR yes 54958969
chr17 55552071 55552092 IRF1 JASPAR yes 54958970
chr17 55552072 55552087 FOXP1 JASPAR yes 54958972
chr17 55552072 55552093 IRF1 JASPAR yes 54958973
chr17 55552073 55552088 STAT2 JASPAR yes 54958974
chr17 55552076 55552088 IRF1 JASPAR yes 54958975
chr17 55552076 55552090 IRF7 JASPAR yes 54958976
chr17 55552077 55552097 RREB1 JASPAR yes 54958977
chr17 55552077 55552098 IRF1 JASPAR yes 54958978
chr17 55552078 55552084 TCF4 TRANSFAC yes 54958979
chr17 55552078 55552093 FOXP1 JASPAR yes 54958980
chr17 55552078 55552099 IRF1 JASPAR yes 54958981
chr17 55552079 55552094 STAT2 JASPAR yes 54958982
chr17 55552082 55552094 IRF1 JASPAR yes 54958983
chr17 55552082 55552096 IRF7 JASPAR yes 54958984
Genes associated with rs546297280[chr17:55552083], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More