EnhancerDB
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  3. rs546316162[chr1:218654587]
Enhancers that have rs546316162[chr1:218654587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546316162[chr1:218654587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218653475 218654624 EP300 UCSC Txn Factor no Conserved 107870381
chr1 218653475 218654624 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870382
chr1 218654585 218654600 RUNX2 JASPAR yes 35384600
Genes associated with rs546316162[chr1:218654587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More