EnhancerDB
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  3. rs546329066[chr1:23437898]
Enhancers that have rs546329066[chr1:23437898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs546329066[chr1:23437898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23437883 23437898 FOXP1 JASPAR yes 27413493
chr1 23437893 23437906 POU3F3 JASPAR yes 27413494
chr1 23437893 23437907 POU1F1 JASPAR yes 27413495
chr1 23437897 23437907 HOXB13 JASPAR yes 27413496
chr1 23437897 23437907 HOXD13 JASPAR yes 27413497
chr1 23437897 23437908 HOXA10 JASPAR yes 27413498
chr1 23437898 23437908 ALX3 JASPAR yes 27413499
chr1 23437898 23437908 EMX1 JASPAR yes 27413500
chr1 23437898 23437908 EMX2 JASPAR yes 27413501
chr1 23437898 23437908 ESX1 JASPAR yes 27413502
chr1 23437898 23437908 GBX2 JASPAR yes 27413503
chr1 23437898 23437908 GSX1 JASPAR yes 27413504
chr1 23437898 23437908 GSX2 JASPAR yes 27413505
chr1 23437898 23437908 HESX1 JASPAR yes 27413506
chr1 23437898 23437908 HOXB2 JASPAR yes 27413507
chr1 23437898 23437908 HOXB3 JASPAR yes 27413508
chr1 23437898 23437908 LBX2 JASPAR yes 27413509
chr1 23437898 23437908 LHX2 JASPAR yes 27413510
chr1 23437898 23437908 LHX6 JASPAR yes 27413511
chr1 23437898 23437908 MEOX1 JASPAR yes 27413512
chr1 23437898 23437908 MEOX2 JASPAR yes 27413513
chr1 23437898 23437908 MIXL1 JASPAR yes 27413514
chr1 23437898 23437908 MNX1 JASPAR yes 27413515
chr1 23437898 23437908 NOTO JASPAR yes 27413516
chr1 23437898 23437908 RAX JASPAR yes 27413517
Genes associated with rs546329066[chr1:23437898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More