EnhancerDB
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  3. rs546345943[chr2:238218227]
Enhancers that have rs546345943[chr2:238218227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238203445 238226755 enh19391
Skin (Keratinocyte) Kidney Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Placenta Thyroid Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
chr2 238218155 238218362 vista35395
VISTA
Transcript factors that have rs546345943[chr2:238218227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238218220 238218232 PKNOX1 JASPAR yes 22240861
chr2 238218220 238218232 PKNOX2 JASPAR yes 22240862
chr2 238218220 238218232 TGIF1 JASPAR yes 22240863
chr2 238218220 238218232 TGIF2 JASPAR yes 22240864
chr2 238218220 238218232 PKNOX1 JASPAR yes 82103479
chr2 238218220 238218232 PKNOX2 JASPAR yes 82103480
chr2 238218220 238218232 TGIF1 JASPAR yes 82103481
chr2 238218220 238218232 TGIF2 JASPAR yes 82103482
chr2 238218224 238218232 MGA JASPAR yes 22240865
chr2 238218224 238218232 TBX15 JASPAR yes 22240866
chr2 238218224 238218232 TBX1 JASPAR yes 22240867
chr2 238218224 238218232 TBX4 JASPAR yes 22240868
chr2 238218224 238218232 TBX5 JASPAR yes 22240869
chr2 238218224 238218232 MGA JASPAR yes 82103483
chr2 238218224 238218232 TBX15 JASPAR yes 82103484
chr2 238218224 238218232 TBX1 JASPAR yes 82103485
chr2 238218224 238218232 TBX4 JASPAR yes 82103486
chr2 238218224 238218232 TBX5 JASPAR yes 82103487
Genes associated with rs546345943[chr2:238218227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More