EnhancerDB
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  3. rs546401583[chr12:46872646]
Enhancers that have rs546401583[chr12:46872646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs546401583[chr12:46872646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46872641 46872656 MEF2C JASPAR yes 120626947
chr12 46872644 46872659 FOXP1 JASPAR yes 120626948
chr12 46872644 46872665 IRF1 JASPAR yes 120626949
chr12 46872645 46872651 TBP TRANSFAC yes 120626950
chr12 46872645 46872660 FOXP1 JASPAR yes 120626951
Genes associated with rs546401583[chr12:46872646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More