EnhancerDB
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  3. rs546428050[chr12:122857660]
Enhancers that have rs546428050[chr12:122857660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122849366 122861555 enh15067
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs546428050[chr12:122857660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122857652 122857663 CDX2 JASPAR yes 124272467
chr12 122857653 122857663 MNX1 JASPAR yes 124272468
chr12 122857653 122857664 HOXA10 JASPAR yes 124272469
chr12 122857653 122857664 HOXC12 JASPAR yes 124272470
chr12 122857654 122857663 CDX1 JASPAR yes 124272471
chr12 122857654 122857664 HOXA13 JASPAR yes 124272472
chr12 122857654 122857664 HOXB13 JASPAR yes 124272473
chr12 122857654 122857664 HOXC10 JASPAR yes 124272474
chr12 122857654 122857664 HOXD13 JASPAR yes 124272475
chr12 122857658 122857664 TBP TRANSFAC yes 124272476
Genes associated with rs546428050[chr12:122857660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More