EnhancerDB
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  3. rs546459162[chr12:111865264]
Enhancers that have rs546459162[chr12:111865264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 111858009 111880135 enh2602
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546459162[chr12:111865264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 111865248 111865264 GLIS1 JASPAR yes 123747130
Genes associated with rs546459162[chr12:111865264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 112079950 112123790 - BRAP ENSG00000089234.11 112123790 214686 Uterus 0.205416 12541