EnhancerDB
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  3. rs546462492[chr14:55559882]
Enhancers that have rs546462492[chr14:55559882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546462492[chr14:55559882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55559873 55559886 SCRT2 JASPAR yes 115528203
chr14 55559873 55559888 SCRT1 JASPAR yes 115528204
chr14 55559877 55559886 SNAI2 JASPAR yes 115528205
chr14 55559877 55559887 FIGLA JASPAR yes 115528206
chr14 55559877 55559887 ID4 JASPAR yes 115528207
chr14 55559877 55559887 TCF3 JASPAR yes 115528208
chr14 55559877 55559887 TCF4 JASPAR yes 115528209
chr14 55559879 55559888 ZEB1 JASPAR yes 115528210
chr14 55559880 55559888 TBX5 JASPAR yes 115528211
Genes associated with rs546462492[chr14:55559882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More