EnhancerDB
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  3. rs546468555[chr17:64466308]
Enhancers that have rs546468555[chr17:64466308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64453792 64473217 enh17315
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546468555[chr17:64466308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64466300 64466314 STAT1 JASPAR yes 55439069
chr17 64466302 64466323 IRF1 JASPAR yes 55439070
chr17 64466303 64466324 IRF1 JASPAR yes 55439071
chr17 64466304 64466319 STAT2 JASPAR yes 55439072
chr17 64466304 64466325 IRF1 JASPAR yes 55439073
chr17 64466305 64466326 IRF1 JASPAR yes 55439074
chr17 64466306 64466327 IRF1 JASPAR yes 55439075
chr17 64466307 64466322 FOXP1 JASPAR yes 55439076
chr17 64466307 64466328 IRF1 JASPAR yes 55439077
chr17 64466308 64466323 FOXP1 JASPAR yes 55439078
chr17 64466308 64466329 IRF1 JASPAR yes 55439079
Genes associated with rs546468555[chr17:64466308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More