EnhancerDB
  1. Home
  2. SNP
  3. rs546470893[chr5:173194025]
Enhancers that have rs546470893[chr5:173194025]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546470893[chr5:173194025]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173194012 173194033 IRF1 JASPAR yes 67902340
chr5 173194015 173194030 LEF1 JASPAR yes 67902341
chr5 173194017 173194038 IRF1 JASPAR yes 67902342
chr5 173194018 173194039 IRF1 JASPAR yes 67902343
Genes associated with rs546470893[chr5:173194025], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More